Deprecated Methods

seriate_reciprocal(object, ...)

refine_seriation(object, ...)

# S4 method for CountMatrix
seriate_reciprocal(object, EPPM = FALSE, margin = c(1, 2), stop = 100)

# S4 method for IncidenceMatrix
seriate_reciprocal(object, margin = c(1, 2), stop = 100)

# S4 method for CountMatrix
refine_seriation(object, cutoff, n = 1000, axes = c(1, 2), ...)

Arguments

object An object. Currently not used. A logical scalar: should the seriation be computed on EPPM instead of raw data? A numeric vector giving the subscripts which the rearrangement will be applied over: 1 indicates rows, 2 indicates columns, c(1, 2) indicates rows then columns, c(2, 1) indicates columns then rows. An integer giving the stopping rule (i.e. maximum number of iterations) to avoid infinite loop. A function that takes a numeric vector as argument and returns a single numeric value (see below). A non-negative integer giving the number of bootstrap replications (see below). A numeric vector giving the subscripts of the CA axes to be used (see below).

N. Frerebeau